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CAZyme Information: PNEJI1_001875-t26_1-p1

You are here: Home > Sequence: PNEJI1_001875-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pneumocystis jirovecii
Lineage Ascomycota; Pneumocystidomycetes; ; Pneumocystidaceae; Pneumocystis; Pneumocystis jirovecii
CAZyme ID PNEJI1_001875-t26_1-p1
CAZy Family GT22
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
612 CAKM01000130|CGC1 70007.27 8.2640
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PjiroveciiSE8 3752 1209962 217 3535
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PNEJI1_001875-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT8 451 606 3.3e-22 0.7431906614785992

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215149 PLN02265 1.34e-163 30 443 67 564
probable phenylalanyl-tRNA synthetase beta chain
273096 pheT_arch 2.11e-98 26 445 40 520
phenylalanyl-tRNA synthetase, beta subunit. Every known example of the phenylalanyl-tRNA synthetase, except the monomeric form of mitochondrial, is an alpha 2 beta 2 heterotetramer. The beta subunits break into two subfamilies that are considerably different in sequence, length, and pattern of gaps. This model represents the subfamily that includes the beta subunit from eukaryotic cytosol, the Archaea, and spirochetes. [Protein synthesis, tRNA aminoacylation]
236592 pheT 6.16e-91 23 439 36 512
phenylalanine--tRNA ligase subunit beta.
223150 PheT 3.00e-76 94 441 178 512
Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis].
133018 GT8_Glycogenin 2.72e-46 450 611 14 188
Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 15 612 39 770
6.79e-36 451 612 25 200
1.26e-35 451 612 16 190
2.15e-33 451 612 21 195
2.20e-33 451 612 21 197

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.12e-105 30 450 63 563
Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_D Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_F Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_H Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_J Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_L Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_N Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens],3L4G_P Crystal structure of Homo Sapiens cytoplasmic Phenylalanyl-tRNA synthetase [Homo sapiens]
7.33e-52 30 445 47 585
Chain B, Phenylalanyl-tRNA synthetase beta subunit [Plasmodium falciparum],7DPI_D Chain D, Phenylalanyl-tRNA synthetase beta subunit [Plasmodium falciparum]
2.13e-46 26 445 44 580
Chain B, Phenylalanyl-tRNA synthetase beta chain, putative [Plasmodium vivax]
9.84e-30 422 611 11 219
Crystal Structure of Human Glycogenin-1 (GYG1) complexed with manganese [Homo sapiens]
1.14e-29 451 611 19 198
Crystal Structure of Human Glycogenin-1 (GYG1), apo form [Homo sapiens],3QVB_A Crystal Structure of Human Glycogenin-1 (GYG1) complexed with manganese and UDP [Homo sapiens],3U2W_A Crystal Structure of Human Glycogenin-1 (GYG1) complexed with manganese and glucose or a glucal species [Homo sapiens],3U2W_B Crystal Structure of Human Glycogenin-1 (GYG1) complexed with manganese and glucose or a glucal species [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.67e-139 26 441 49 548
Phenylalanine--tRNA ligase beta subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=frs1 PE=3 SV=1
1.65e-138 7 441 29 551
Phenylalanine--tRNA ligase beta subunit OS=Candida albicans OX=5476 GN=FRS1 PE=2 SV=3
1.30e-122 26 447 48 560
Phenylalanine--tRNA ligase beta subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FRS1 PE=1 SV=3
1.09e-104 30 450 63 563
Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens OX=9606 GN=FARSB PE=1 SV=3
3.31e-103 30 450 63 563
Phenylalanine--tRNA ligase beta subunit OS=Pongo abelii OX=9601 GN=FARSB PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000041 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in PNEJI1_001875-t26_1-p1.