logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PMAA_100430-t26_1-p1

You are here: Home > Sequence: PMAA_100430-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_100430-t26_1-p1
CAZy Family GT33
CAZyme Description glucose-methanol-choline (gmc) oxidoreductase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
551 DS995902|CGC25 59216.36 4.8256
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.3.16:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 42 537 9.6e-100 0.9929577464788732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 7.64e-70 36 546 1 542
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 3.59e-55 42 551 5 539
choline dehydrogenase; Validated
398739 GMC_oxred_C 3.18e-28 400 532 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 7.45e-14 26 525 41 565
Protein HOTHEAD
366272 GMC_oxred_N 1.72e-11 115 322 21 216
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 551 1 551
4.71e-211 14 540 9 572
1.80e-180 39 540 24 573
1.34e-141 44 540 36 581
2.91e-97 36 536 20 573

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.39e-41 44 533 42 594
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
2.05e-40 44 540 3 564
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
7.25e-40 44 540 4 565
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
9.42e-39 37 541 8 531
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
1.29e-38 37 541 8 531
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.37e-48 44 533 42 586
Pyranose dehydrogenase OS=Agaricus bisporus OX=5341 GN=pdh1 PE=1 SV=1
2.01e-45 44 533 38 587
Pyranose dehydrogenase OS=Agaricus campestris OX=56157 GN=pdh1 PE=1 SV=1
2.04e-45 44 544 3 541
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
3.73e-45 14 537 18 616
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
3.73e-45 14 537 18 616
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.803666 0.196334

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_100430-t26_1-p1.