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CAZyme Information: PMAA_090560-t26_1-p1
You are here: Home > Sequence: PMAA_090560-t26_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Talaromyces marneffei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei | |||||||||||
| CAZyme ID | PMAA_090560-t26_1-p1 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | class V chitinase, putative | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH18 | 18 | 369 | 1.2e-53 | 0.972972972972973 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395573 | Glyco_hydro_18 | 3.25e-72 | 20 | 357 | 3 | 307 | Glycosyl hydrolases family 18. |
| 214753 | Glyco_18 | 1.38e-50 | 20 | 357 | 3 | 334 | Glyco_18 domain. |
| 119365 | GH18_chitinase | 5.53e-47 | 20 | 357 | 2 | 322 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
| 119349 | GH18_chitinase-like | 1.23e-37 | 20 | 202 | 2 | 178 | The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model. |
| 225862 | ChiA | 4.96e-32 | 62 | 372 | 114 | 437 | Chitinase, GH18 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.80e-275 | 1 | 375 | 1 | 375 | |
| 1.83e-209 | 1 | 374 | 1 | 374 | |
| 3.29e-141 | 8 | 374 | 8 | 423 | |
| 3.54e-137 | 8 | 371 | 8 | 425 | |
| 1.90e-136 | 11 | 371 | 14 | 427 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.32e-25 | 44 | 249 | 58 | 267 | Chain AAA, Peroxiredoxin [Clostridioides difficile 630] |
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| 1.70e-25 | 44 | 249 | 77 | 286 | Chain AAA, Peroxiredoxin [Clostridioides difficile 630] |
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| 8.73e-20 | 77 | 357 | 89 | 383 | Crystal structure of Chitinase D from Serratia proteamaculans at 1.45 Angstrom resolution [Serratia proteamaculans 568],4Q22_A Crystal structure of Chitinase D from Serratia proteamaculans in complex with N-acetyl glucosamine at 1.93 Angstrom resolution [Serratia proteamaculans 568] |
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| 8.87e-20 | 77 | 357 | 86 | 380 | Structural and thermodynamic signatures of ligand binding to an enigmatic chitinase-D from Serratia proteamaculans [Serratia proteamaculans 568] |
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| 9.07e-20 | 77 | 357 | 89 | 383 | Crystal Structure of Chitinase D from Serratia proteamaculans in complex with N-acetyl glucosamine, a hydrolyzed product of hexasaccharide at 1.7 Angstrom resolution [Serratia proteamaculans 568] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.79e-20 | 77 | 357 | 124 | 384 | Endochitinase 1 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) OX=655844 GN=chit1 PE=3 SV=1 |
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| 2.43e-18 | 77 | 352 | 123 | 378 | Chitinase 1 OS=Aphanocladium album OX=12942 GN=CHI1 PE=1 SV=2 |
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| 4.43e-18 | 77 | 357 | 124 | 383 | Endochitinase 1 OS=Metarhizium anisopliae OX=5530 GN=chit1 PE=1 SV=1 |
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| 6.55e-17 | 77 | 357 | 156 | 438 | Chitinase A1 OS=Niallia circulans OX=1397 GN=chiA1 PE=1 SV=1 |
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| 9.02e-17 | 77 | 357 | 123 | 383 | Endochitinase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) OX=443226 GN=CTS1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000269 | 0.999717 | CS pos: 16-17. Pr: 0.9667 |