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CAZyme Information: PMAA_087910-t26_1-p1

You are here: Home > Sequence: PMAA_087910-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_087910-t26_1-p1
CAZy Family GT1
CAZyme Description pectin methylesterase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
404 DS995901|CGC1 43889.86 6.4853
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PMAA_087910-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 59 372 2.3e-54 0.9409722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 1.39e-25 61 370 18 274
putative pectinesterase
215367 PLN02682 5.13e-24 46 360 67 341
pectinesterase family protein
178372 PLN02773 1.35e-20 65 361 16 277
pectinesterase
178113 PLN02497 1.03e-19 61 360 39 300
probable pectinesterase
178606 PLN03043 2.29e-17 50 360 219 498
Probable pectinesterase/pectinesterase inhibitor; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.78e-304 1 404 1 404
5.13e-209 33 403 32 400
4.85e-156 9 399 1 380
2.62e-153 28 399 22 380
2.38e-149 18 401 7 384

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.22e-21 66 401 19 298
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
4.40e-21 66 401 19 298
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.59e-09 48 391 4 310
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1.59e-08 65 340 43 302
Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.31e-22 13 401 7 326
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
3.70e-21 65 371 43 323
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
1.13e-19 66 401 44 323
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.13e-19 66 401 44 323
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
9.77e-19 66 359 44 296
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.003813 0.996195 CS pos: 25-26. Pr: 0.9563

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_087910-t26_1-p1.