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CAZyme Information: PMAA_062580-t26_1-p1

You are here: Home > Sequence: PMAA_062580-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_062580-t26_1-p1
CAZy Family GH3
CAZyme Description beta-xylosidase XylA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
799 DS995900|CGC17 87190.60 4.7265
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:31 3.2.1.8:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 97 345 6.7e-53 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 0.0 50 765 30 768
Probable beta-xylosidase; Provisional
185053 PRK15098 1.15e-62 131 768 118 753
beta-glucosidase BglX.
396478 Glyco_hydro_3_C 6.25e-51 416 642 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
224389 BglX 4.50e-50 68 471 23 392
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747 Glyco_hydro_3 2.44e-24 130 374 85 313
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 797 1 795
0.0 1 799 1 797
0.0 12 795 12 793
0.0 1 799 1 795
0.0 1 795 1 791

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 24 790 3 764
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
0.0 23 790 2 766
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
0.0 23 791 2 767
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
4.10e-282 49 788 1 740
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
8.24e-282 49 788 1 740
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 13 797 10 804
Probable exo-1,4-beta-xylosidase xlnD OS=Aspergillus aculeatus OX=5053 GN=xlnD PE=3 SV=1
0.0 13 797 10 803
Probable exo-1,4-beta-xylosidase xlnD OS=Aspergillus japonicus OX=34381 GN=xlnD PE=1 SV=1
0.0 9 796 9 796
Probable exo-1,4-beta-xylosidase xlnD OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xlnD PE=3 SV=1
0.0 9 796 9 797
Exo-1,4-beta-xylosidase xlnD OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xlnD PE=1 SV=1
0.0 9 788 15 801
Exo-1,4-beta-xylosidase xlnD OS=Aspergillus awamori OX=105351 GN=xlnD PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999770 CS pos: 21-22. Pr: 0.9739

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_062580-t26_1-p1.