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CAZyme Information: PMAA_053410-t26_1-p1

You are here: Home > Sequence: PMAA_053410-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_053410-t26_1-p1
CAZy Family GH18
CAZyme Description endo-1,4-beta-xylanase 1 precursor, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
289 30105.93 4.6387
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:12

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 61 225 1e-60 0.943502824858757

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 8.55e-83 54 218 1 168
Glycosyl hydrolases family 11.
395595 CBM_1 1.06e-13 257 285 1 29
Fungal cellulose binding domain.
197593 fCBD 1.16e-13 256 289 1 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.84e-184 1 289 1 289
7.43e-115 1 225 1 226
3.02e-109 1 225 1 225
1.34e-105 1 225 1 225
1.34e-105 1 225 1 225

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.96e-93 53 225 1 173
Chain A, Endo-1,4-beta-xylanase I [Trichoderma reesei]
8.12e-55 49 225 25 206
Crystal structure of Aspergillus niger GH11 endoxylanase XynA in complex with xylobiose epoxide activity based probe [Aspergillus niger]
2.81e-54 53 225 2 179
Endo-1,4-Beta-Xylanase C [Aspergillus awamori],1T6G_C Chain C, Endo-1,4-beta-xylanase I [Aspergillus niger],1T6G_D Chain D, Endo-1,4-beta-xylanase I [Aspergillus niger]
8.20e-54 53 225 3 180
Xylanase C from Aspergillus kawachii F131W mutant [Aspergillus luchuensis]
2.25e-53 53 225 2 179
Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_B Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_C Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_D Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.66e-105 1 225 1 224
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=xyn1 PE=1 SV=1
2.66e-105 1 225 1 224
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=TRIREDRAFT_74223 PE=1 SV=1
1.62e-84 31 288 17 281
Endo-1,4-beta-xylanase B OS=Talaromyces funiculosus OX=28572 GN=xynB PE=1 SV=1
4.30e-62 64 289 55 290
Endo-1,4-beta-xylanase B OS=Phanerodontia chrysosporium OX=2822231 GN=xynB PE=1 SV=1
7.42e-60 1 225 1 227
Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000265 0.999700 CS pos: 19-20. Pr: 0.9834

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_053410-t26_1-p1.