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CAZyme Information: PMAA_050940-t26_1-p1

You are here: Home > Sequence: PMAA_050940-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_050940-t26_1-p1
CAZy Family GH18
CAZyme Description cellobiohydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
461 48171.51 4.5749
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.91:55 3.2.1.4:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 128 421 1.5e-95 0.935374149659864

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 1.51e-160 141 424 13 293
Glycosyl hydrolases family 6.
227616 CelA1 9.61e-48 103 460 24 443
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].
395595 CBM_1 3.65e-13 24 51 2 29
Fungal cellulose binding domain.
197593 fCBD 7.93e-12 23 55 2 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.49e-311 1 461 1 461
4.27e-292 1 461 1 457
4.27e-292 1 461 1 457
7.86e-288 1 461 1 457
9.15e-287 1 461 1 457

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.52e-175 101 458 5 360
Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK0_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK2_A Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK2_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei]
2.70e-175 101 458 7 362
Chain A, CELLOBIOHYDROLASE II CORE PROTEIN [Trichoderma reesei]
1.09e-174 101 458 7 362
Chain A, CELLOBIOHYDROLASE II [Trichoderma reesei],1CB2_B Chain B, CELLOBIOHYDROLASE II [Trichoderma reesei],1QJW_A Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QJW_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei]
3.02e-174 101 459 5 363
Chain A, Cellobiohydrolase Family 6 [Thermochaetoides thermophila]
4.13e-174 101 458 5 360
Chain A, Exoglucanase 2 [Trichoderma reesei],4AU0_B Chain B, Exoglucanase 2 [Trichoderma reesei],4AX6_A Chain A, Exoglucanase 2 [Trichoderma reesei],4AX6_B Chain B, Exoglucanase 2 [Trichoderma reesei],4AX7_A Chain A, EXOGLUCANASE 2 [Trichoderma reesei],4AX7_B Chain B, EXOGLUCANASE 2 [Trichoderma reesei],4AX7_C Chain C, EXOGLUCANASE 2 [Trichoderma reesei],4AX7_D Chain D, EXOGLUCANASE 2 [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.90e-233 6 458 6 448
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=cbhC PE=3 SV=1
4.30e-231 6 458 6 452
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cbhC PE=3 SV=1
4.30e-231 6 458 6 452
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=cbhC PE=3 SV=1
5.26e-226 5 458 4 466
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=cbhC PE=3 SV=1
2.15e-218 16 458 15 457
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=cbhC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000250 0.999721 CS pos: 19-20. Pr: 0.9799

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_050940-t26_1-p1.