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CAZyme Information: PMAA_050600-t26_1-p1

You are here: Home > Sequence: PMAA_050600-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_050600-t26_1-p1
CAZy Family GH171
CAZyme Description polygalacturonase A precursor, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
795 DS995903|CGC14 83599.69 5.0754
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:3 3.2.1.15:1 3.2.1.15:14 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 62 338 1.4e-66 0.9201388888888888
GH28 459 784 2.1e-66 0.916923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 6.25e-114 463 791 1 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178051 PLN02432 9.63e-39 52 338 13 274
putative pectinesterase
395871 Pectinesterase 1.28e-37 63 333 10 275
Pectinesterase.
215367 PLN02682 1.05e-35 43 354 63 366
pectinesterase family protein
178372 PLN02773 1.76e-34 58 337 10 283
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 795 1 795
0.0 31 792 28 766
0.0 9 792 8 771
9.63e-161 446 792 23 369
9.63e-161 446 792 23 369

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.07e-139 448 792 3 348
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
9.00e-90 439 790 2 341
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
9.00e-90 439 790 2 341
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.04e-88 447 790 2 333
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.97e-84 454 790 13 336
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.44e-138 448 792 27 372
Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1
9.20e-134 438 792 163 514
Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1
7.07e-133 425 792 134 492
Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2
1.10e-132 440 792 146 495
Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1
1.10e-132 440 792 146 495
Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000203 0.999793 CS pos: 18-19. Pr: 0.9837

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_050600-t26_1-p1.