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CAZyme Information: PMAA_020920-t26_1-p1

You are here: Home > Sequence: PMAA_020920-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_020920-t26_1-p1
CAZy Family CE1
CAZyme Description glucosylceramidase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
457 48825.34 4.7216
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 20 454 7.6e-179 0.9954853273137697

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 6.81e-24 19 454 32 427
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
405300 Glyco_hydr_30_2 2.46e-16 25 338 6 366
O-Glycosyl hydrolase family 30.
407314 Glyco_hydro_30C 6.69e-08 368 453 1 63
Glycosyl hydrolase family 30 beta sandwich domain.
307945 Glyco_hydro_30 2.53e-07 126 264 96 236
Glycosyl hydrolase family 30 TIM-barrel domain.
396577 Glyco_hydro_59 1.27e-05 53 363 20 293
Glycosyl hydrolase family 59.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 457 1 457
2.52e-218 10 454 11 453
1.73e-203 23 457 25 455
2.44e-138 15 456 19 463
9.05e-135 15 456 15 459

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.19e-206 23 457 25 455
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
2.04e-113 19 455 1 447
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
4.10e-112 19 455 8 454
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
4.07e-110 21 409 22 421
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
1.32e-108 22 409 94 492
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.43e-113 9 455 8 471
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
1.33e-14 45 302 81 350
Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum OX=5544 PE=1 SV=1
1.18e-10 30 376 64 414
Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=neg-1 PE=1 SV=2
5.27e-10 23 402 87 484
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
4.99e-09 19 400 84 484
Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000236 0.999755 CS pos: 21-22. Pr: 0.9703

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_020920-t26_1-p1.