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CAZyme Information: PMAA_011750-t26_1-p1

You are here: Home > Sequence: PMAA_011750-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_011750-t26_1-p1
CAZy Family AA7
CAZyme Description endo-1,4-beta-xylanase 1 precursor, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
232 25138.65 5.0345
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:12

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 63 227 6.6e-60 0.943502824858757

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 1.52e-84 56 227 1 175
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.33e-168 1 232 1 232
3.28e-141 1 232 1 232
2.21e-139 1 232 1 232
1.10e-108 1 232 1 229
1.14e-108 1 232 1 230

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.19e-99 55 232 1 178
Chain A, Endo-1,4-beta-xylanase I [Trichoderma reesei]
5.04e-55 53 232 27 211
Crystal structure of Aspergillus niger GH11 endoxylanase XynA in complex with xylobiose epoxide activity based probe [Aspergillus niger]
8.80e-55 55 232 2 184
Endo-1,4-Beta-Xylanase C [Aspergillus awamori],1T6G_C Chain C, Endo-1,4-beta-xylanase I [Aspergillus niger],1T6G_D Chain D, Endo-1,4-beta-xylanase I [Aspergillus niger]
1.25e-54 55 232 2 184
Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_B Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_C Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger],1UKR_D Structure Of Endo-1,4-Beta-Xylanase C [Aspergillus niger]
2.58e-54 55 232 3 185
Xylanase C from Aspergillus kawachii F131W mutant [Aspergillus luchuensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.28e-108 1 232 1 229
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=TRIREDRAFT_74223 PE=1 SV=1
2.28e-108 1 232 1 229
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=xyn1 PE=1 SV=1
1.71e-71 31 222 17 210
Endo-1,4-beta-xylanase B OS=Talaromyces funiculosus OX=28572 GN=xynB PE=1 SV=1
5.13e-64 1 230 1 230
Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1
1.52e-62 1 230 1 227
Endo-1,4-beta-xylanase xynf11a OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xlnA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000294 0.999683 CS pos: 19-20. Pr: 0.9716

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_011750-t26_1-p1.