CAZyme Information: PMAA_008970-t26_1-p1

Basic Information

• Species: Talaromyces marneffei
• Lineage: Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
• CAZyme ID: PMAA_008970-t26_1-p1
• CAZy Family: AA5
• CAZyme Description: exo-beta-1,3-glucanase, putative

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
789		84059.14	4.7770

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224	10194	441960	145	10049

• Gene Location: location=DS995906:127184-129848(+)

Full Sequence      

MRYFSLLVSSILLASTGTESFRLPDNEPFDGLNGTANAHVLRAADMNDPPYWLADIAHQG
FTPYAHGGYAVFRNVKDYGAVGDGVTDDTLAINNAISDGGRFGPASRQTSSTTPAIIYFP
AGTYVVSSSIINYYFTQLIGNPNSPAVLKATPGFVGLGLIDGDQYQPDGNQGWISTNVFY
RQIRNLILDLTAIPASGGSTGIHWPTGQATSLQNVQIKLNADPGTKAQGLFIENGSGGFL
TDVIVTGGLYGFNVGNQQFTMRNVTISSAVVAISQIWNWGWTYSGLTIENCQTAFDFSLG
GPTSISAGSVTIIDSKIGNCGTFLKTAWTPTSSPPGAGNLIIENVALSNVPVAIRGPNGV
YLPGGTITIPAFGQGKTYTPMGPNLLNGPFDAVPRPPGLLQSGSYNYFTKSKPQYESYGT
ASVLSMRVFGAKGDGVTDDTIIIQAVLNVAAALGKIAFFDYGVYVVTNTIYIPPGSRVVG
EAYPTILGSGSKFSNIESPYPVVKVGKEGDSGFIEVSDLIVSTRGGAAGAVLIEYNLNGE
QGSGLWDVHTRIGGFIGSDLQVANCPITGPVTLACEAAFMSLHVTSSAKNVYLENNWIWT
ADHDLDDPKDTRISVYTGRGALIEGSNILMYGTSVEHHSLYQYSFYGASNVMAGFIQTET
PYYQPIPDARSGPYVSNAAFHDPDYGSCLEGNCNALGLYVINSNSIYFYGAGLYSFFNHY
STDCSNPGHREKCQSEIFRVDGSTTAALRVYTLNTVGVTNMVTLDGTSVALFSDNIGVFN
DGFTLFKYK

Enzyme Prediction     

EC	3.2.1.58:16

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	46	784	9.4e-256	0.9837837837837838

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	3.93e-92	72	296	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	3.61e-08	429	536	7	122	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721	Pgu1	2.23e-04	74	291	84	295	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA21686.1|GH55	0.0	1	789	1	789
QKX54382.1|GH55	0.0	7	789	6	807
QGA16171.1|GH55	0.0	38	788	45	795
CAP97426.1|GH55	0.0	33	779	63	807
QQK46226.1|GH55	0.0	48	779	76	808

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	6.02e-206	51	775	6	742	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	9.21e-197	32	784	7	753	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]
7CHU_A	7.33e-09	74	151	76	150	Chain A, Putative pectin lyase [Geobacillus virus E2],7CHU_B Chain B, Putative pectin lyase [Geobacillus virus E2],7CHU_C Chain C, Putative pectin lyase [Geobacillus virus E2]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P49426|EXG1_COCCA	2.33e-261	1	779	1	777	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	7.28e-182	51	786	43	873	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P53626|E13B_TRIHA	1.04e-61	7	769	7	740	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000326	0.999655	CS pos: 20-21. Pr: 0.9722

TMHMM  Annotations     

There is no transmembrane helices in PMAA_008970-t26_1-p1.