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CAZyme Information: PMAA_007960-t26_1-p1

You are here: Home > Sequence: PMAA_007960-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Talaromyces marneffei
Lineage Ascomycota; Eurotiomycetes; ; Trichocomaceae; Talaromyces; Talaromyces marneffei
CAZyme ID PMAA_007960-t26_1-p1
CAZy Family AA4
CAZyme Description glucan 1,3-beta-glucosidase precursor, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1115 118273.37 4.1127
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmarneffeiATCC18224 10194 441960 145 10049
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.58:16

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 40 815 8e-247 0.9905405405405405

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
403800 Pectate_lyase_3 5.62e-80 71 313 1 213
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721 Pgu1 0.001 73 130 84 125
Polygalacturonase [Carbohydrate transport and metabolism].
274992 Syntroph_Cxxx 0.002 1041 1075 61 95
Syntrophus aciditrophicus Cys-Xaa-Xaa-Xaa repeat radical SAM target protein. This model represents a paralogous family, in Syntrophus aciditrophicus SB, of peptides a conserved N-terminal region followed by ten to seventeen direct repeats of the sequence CXXX (see repeats model TIGR04114). The N-terminal region includes a hydrophobic patch that is not shared by most members of family TIGR04114.
403800 Pectate_lyase_3 0.006 444 498 4 62
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1070 46 1114
0.0 1 990 1 956
6.45e-317 1 895 1 891
1.75e-257 1 820 45 875
4.90e-254 1 982 42 985

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.38e-183 50 795 6 733
Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
2.45e-177 22 817 6 755
Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.97e-189 50 815 43 871
Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
6.46e-148 48 795 46 764
Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
6.84e-39 121 811 99 747
Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000039 0.000010

TMHMM  Annotations      help

There is no transmembrane helices in PMAA_007960-t26_1-p1.