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CAZyme Information: PIW_T011598-RA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium iwayamae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium iwayamae | |||||||||||
| CAZyme ID | PIW_T011598-RA-p1 | |||||||||||
| CAZy Family | GT31|GT10 | |||||||||||
| CAZyme Description | Polysaccharide lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL3 | 36 | 206 | 1.5e-61 | 0.9484536082474226 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397360 | Pectate_lyase | 9.91e-80 | 29 | 222 | 1 | 200 | Pectate lyase. |
| 223021 | PHA03247 | 1.27e-05 | 213 | 341 | 2714 | 2849 | large tegument protein UL36; Provisional |
| 183558 | PRK12495 | 1.38e-04 | 235 | 337 | 62 | 168 | hypothetical protein; Provisional |
| 237030 | kgd | 2.78e-04 | 248 | 341 | 37 | 113 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit. |
| 223033 | PHA03291 | 5.63e-04 | 201 | 339 | 150 | 280 | envelope glycoprotein I; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.32e-108 | 1 | 272 | 1 | 281 | |
| 2.04e-92 | 18 | 245 | 21 | 259 | |
| 4.68e-91 | 8 | 244 | 11 | 258 | |
| 3.65e-72 | 13 | 244 | 9 | 273 | |
| 5.16e-72 | 13 | 244 | 9 | 273 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.97e-24 | 59 | 245 | 8 | 224 | Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B90_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi] |
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| 5.66e-23 | 59 | 245 | 126 | 342 | Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B4N_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_A Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi] |
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| 6.57e-21 | 26 | 244 | 109 | 344 | Chain A, Pectate lyase [Pectobacterium carotovorum],4U49_B Chain B, Pectate lyase [Pectobacterium carotovorum],4U4B_A Chain A, Pectate lyase [Pectobacterium carotovorum] |
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| 4.24e-19 | 36 | 160 | 1 | 135 | Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15] |
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| 3.16e-14 | 46 | 184 | 24 | 170 | C. bescii Family 3 pectate lyase double mutant K108A/D107N in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725],4YZX_B C. bescii Family 3 pectate lyase double mutant K108A/D107N in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.29e-54 | 33 | 241 | 28 | 241 | Probable pectate lyase G OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyG PE=3 SV=1 |
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| 2.21e-52 | 16 | 241 | 11 | 237 | Probable pectate lyase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyD PE=3 SV=1 |
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| 2.21e-52 | 16 | 241 | 11 | 237 | Probable pectate lyase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyD PE=3 SV=1 |
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| 9.58e-52 | 5 | 228 | 7 | 240 | Probable pectate lyase G OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyG PE=3 SV=1 |
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| 9.33e-51 | 33 | 241 | 22 | 236 | Probable pectate lyase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000243 | 0.999763 | CS pos: 24-25. Pr: 0.9715 |