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CAZyme Information: PIW_T009658-RA-p1

You are here: Home > Sequence: PIW_T009658-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium iwayamae
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium iwayamae
CAZyme ID PIW_T009658-RA-p1
CAZy Family GT1
CAZyme Description Carbohydrate-binding protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
589 62868.64 6.6064
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GiwayamaeDAOMBR242034 14874 1223558 0 14874
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 11 533 8.6e-101 0.9817518248175182

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.05e-42 19 535 7 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 1.69e-22 19 281 5 282
choline dehydrogenase; Validated
366272 GMC_oxred_N 6.38e-16 108 273 24 204
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 2.26e-09 20 290 56 323
Protein HOTHEAD
398739 GMC_oxred_C 3.15e-08 394 527 1 143
GMC oxidoreductase. This domain found associated with pfam00732.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.41e-158 16 529 25 546
2.30e-156 6 531 10 547
7.01e-144 6 531 14 549
4.45e-138 20 513 22 526
1.25e-136 20 534 24 550

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.52e-45 17 532 5 540
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
7.89e-45 20 532 3 535
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.19e-30 19 532 229 764
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
1.09e-27 19 307 7 308
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
2.07e-27 19 307 229 530
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.50e-43 17 532 232 767
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
6.43e-13 19 291 2 292
Oxygen-dependent choline dehydrogenase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=betA PE=3 SV=1
1.66e-12 19 291 64 356
Glucose dehydrogenase [FAD, quinone] OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Gld PE=3 SV=4
3.34e-12 17 528 4 530
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1
8.65e-12 19 291 45 337
Fatty acid photodecarboxylase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=FAP PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.008810 0.991167 CS pos: 18-19. Pr: 0.7256

TMHMM  Annotations      help

There is no transmembrane helices in PIW_T009658-RA-p1.