logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PIW_T008569-RA-p1

You are here: Home > Sequence: PIW_T008569-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium iwayamae
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium iwayamae
CAZyme ID PIW_T008569-RA-p1
CAZy Family GH72
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
149 17169.92 4.5653
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GiwayamaeDAOMBR242034 14874 1223558 0 14874
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PIW_T008569-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM9 33 133 3.7e-17 0.5274725274725275

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
187678 CBM9_like_3 8.82e-32 33 141 1 106
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily may co-occur with various other domains.
187676 CBM9_like_2 8.41e-11 27 130 7 112
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized subfamily are typically found at the N-terminus of longer proteins that lack additional annotation with domain footprints.
187677 CBM9_like_4 6.86e-04 30 114 1 93
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.01e-29 27 143 13 128
9.23e-28 31 143 44 155
2.75e-26 27 143 35 148
4.13e-26 28 141 32 142
4.43e-26 31 141 41 148

PDB Hits      help

PIW_T008569-RA-p1 has no PDB hit.

Swiss-Prot Hits      help

PIW_T008569-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000056 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in PIW_T008569-RA-p1.