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CAZyme Information: PIW_T005434-RA-p1

You are here: Home > Sequence: PIW_T005434-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium iwayamae
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium iwayamae
CAZyme ID PIW_T005434-RA-p1
CAZy Family GH31
CAZyme Description Pectin lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
412 PiwaDAOMBR242034_SC00733|CGC1 43484.38 9.5254
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GiwayamaeDAOMBR242034 14874 1223558 0 14874
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 132 326 6.6e-78 0.9893048128342246

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 6.37e-32 130 326 1 187
Amb_all domain.
366158 Pec_lyase_C 1.63e-15 128 325 15 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
226384 PelB 6.28e-15 127 331 82 279
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.34e-158 28 411 21 398
1.91e-158 28 411 21 398
2.70e-158 28 411 21 398
4.06e-158 26 409 53 430
5.80e-153 26 409 53 430

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.49e-74 32 368 5 319
Pectin Lyase A [Aspergillus niger]
6.07e-72 31 376 4 328
Pectin Lyase B [Aspergillus niger]
1.21e-71 32 368 5 319
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
4.71e-13 139 341 76 273
Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
1.13e-12 139 341 76 273
Chain A, Pectate lyase C [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.15e-94 31 370 24 341
Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1
2.48e-92 36 376 30 350
Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1
2.48e-92 36 376 30 350
Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1
3.06e-90 31 376 24 349
Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2
3.06e-90 31 376 24 349
Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000245 0.999749 CS pos: 27-28. Pr: 0.9744

TMHMM  Annotations      download full data without filtering help

Start End
7 29