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CAZyme Information: PIW_T005330-RA-p1

You are here: Home > Sequence: PIW_T005330-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium iwayamae
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium iwayamae
CAZyme ID PIW_T005330-RA-p1
CAZy Family GH30
CAZyme Description Thioredoxin reductase 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
244 26257.31 4.3433
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GiwayamaeDAOMBR242034 14874 1223558 0 14874
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PIW_T005330-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 17 222 1.1e-39 0.8285714285714286

CDD Domains      help

PIW_T005330-RA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.52e-55 30 193 39 201
3.09e-51 30 193 694 856
5.59e-49 48 193 2 146
5.38e-44 30 193 679 841
8.71e-44 17 195 1 177

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.67e-16 69 188 50 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PIW_T005330-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.735047 0.264944

TMHMM  Annotations      help

There is no transmembrane helices in PIW_T005330-RA-p1.