logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PIW_T004603-RA-p1

You are here: Home > Sequence: PIW_T004603-RA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium iwayamae
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium iwayamae
CAZyme ID PIW_T004603-RA-p1
CAZy Family GH16|GT48
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
308 32110.07 6.8158
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GiwayamaeDAOMBR242034 14874 1223558 0 14874
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PIW_T004603-RA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 256 8.4e-57 0.9346938775510204

CDD Domains      help

PIW_T004603-RA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.95e-62 10 193 70 249
4.00e-61 16 193 14 187
3.98e-60 16 193 78 251
9.27e-59 10 217 8 215
1.54e-58 17 193 17 189

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.83e-22 88 192 67 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PIW_T004603-RA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000477 0.999510 CS pos: 20-21. Pr: 0.9538

TMHMM  Annotations      help

There is no transmembrane helices in PIW_T004603-RA-p1.