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CAZyme Information: PITG_21641-t26_1-p1

You are here: Home > Sequence: PITG_21641-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_21641-t26_1-p1
CAZy Family PL3
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
355 38656.20 6.2251
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_21641-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 3 230 3.6e-55 0.889795918367347

CDD Domains      help

PITG_21641-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.18e-236 1 355 1 355
2.20e-123 1 181 17 210
2.28e-123 1 181 17 210
2.28e-123 1 181 17 210
2.23e-96 1 166 17 195

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.01e-10 34 165 36 174
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_21641-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000024 0.000017

TMHMM  Annotations      help

There is no transmembrane helices in PITG_21641-t26_1-p1.