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CAZyme Information: PITG_21039-t26_1-p1

You are here: Home > Sequence: PITG_21039-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_21039-t26_1-p1
CAZy Family PL3
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
142 14964.44 3.7829
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_21039-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 140 1e-40 0.46938775510204084

CDD Domains      help

PITG_21039-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.24e-94 1 142 1 142
4.85e-92 1 142 1 142
1.09e-78 1 140 1 141
3.10e-78 1 140 1 141
1.24e-77 1 140 1 141

PDB Hits      help

PITG_21039-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PITG_21039-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000222 0.999760 CS pos: 20-21. Pr: 0.9802

TMHMM  Annotations      help

There is no transmembrane helices in PITG_21039-t26_1-p1.