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CAZyme Information: PITG_20561-t26_1-p1
Basic Information
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| Species |
Phytophthora infestans
|
| Lineage |
Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
|
| CAZyme ID |
PITG_20561-t26_1-p1
|
| CAZy Family |
PL1 |
| CAZyme Description |
conserved hypothetical protein
|
| CAZyme Property |
| Protein Length |
CGC |
Molecular Weight |
Isoelectric Point |
| 939 |
|
100588.36 |
6.3894 |
|
| Genome Property |
| Genome Version/Assembly ID |
Genes |
Strain NCBI Taxon ID |
Non Protein Coding Genes |
Protein Coding Genes |
| FungiDB-61_PinfestansT30-4 |
19344 |
403677 |
1547 |
17797
|
|
| Gene Location |
No EC number prediction in PITG_20561-t26_1-p1.
| Family |
Start |
End |
Evalue |
family coverage |
| GH141 |
424 |
667 |
2.1e-23 |
0.4497153700189753 |
| Cdd ID |
Domain |
E-Value |
qStart |
qEnd |
sStart |
sEnd |
Domain Description |
| 404168
|
Beta_helix |
6.51e-07 |
554 |
665 |
3 |
112 |
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
| 404168
|
Beta_helix |
1.61e-04 |
552 |
608 |
93 |
149 |
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
| Hit ID |
E-Value |
Query Start |
Query End |
Hit Start |
Hit End |
| 8.56e-13 |
364 |
667 |
191 |
452 |
| 1.25e-12 |
392 |
670 |
368 |
602 |
| 1.45e-12 |
392 |
670 |
148 |
382 |
| 5.94e-12 |
366 |
667 |
189 |
452 |
| 7.71e-12 |
366 |
667 |
190 |
449 |
PITG_20561-t26_1-p1 has no PDB hit.
PITG_20561-t26_1-p1 has no Swissprot hit.
This protein is predicted as SP
| Other |
SP_Sec_SPI |
CS Position |
| 0.000245 |
0.999714 |
CS pos: 19-20. Pr: 0.9718 |
There is no transmembrane helices in PITG_20561-t26_1-p1.
