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CAZyme Information: PITG_20312-t26_1-p1

You are here: Home > Sequence: PITG_20312-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_20312-t26_1-p1
CAZy Family PL1
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
270 DS028239|CGC1 29282.19 4.3220
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_20312-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 238 6e-70 0.9020408163265307

CDD Domains      help

PITG_20312-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.24e-201 1 270 1 270
1.72e-198 1 270 1 270
2.65e-177 1 270 1 270
3.10e-176 1 270 1 270
5.54e-158 1 267 1 268

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.08e-20 25 193 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_20312-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000246 0.999742 CS pos: 24-25. Pr: 0.9700

TMHMM  Annotations      help

There is no transmembrane helices in PITG_20312-t26_1-p1.