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CAZyme Information: PITG_19729-t26_1-p1

You are here: Home > Sequence: PITG_19729-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_19729-t26_1-p1
CAZy Family GT8
CAZyme Description glycoside hydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
298 32655.79 6.4891
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 61 219 4.3e-39 0.6018518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 6.44e-71 5 220 4 259
Probable beta-xylosidase; Provisional
224389 BglX 9.23e-26 77 218 80 205
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747 Glyco_hydro_3 4.86e-19 74 185 82 175
Glycosyl hydrolase family 3 N terminal domain.
185053 PRK15098 9.08e-17 78 185 118 213
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.27e-61 21 220 61 289
1.27e-61 21 220 61 289
2.98e-60 21 220 37 261
7.57e-59 27 220 40 258
7.57e-59 27 220 40 258

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.94e-43 59 219 64 226
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
2.94e-43 59 219 64 226
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
8.89e-32 36 211 65 241
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
8.90e-32 36 211 65 241
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
1.04e-30 8 211 19 239
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.57e-56 31 220 38 253
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
1.17e-55 19 219 37 258
Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1
9.02e-55 19 219 47 268
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1
1.37e-52 21 219 32 250
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
1.99e-52 19 219 42 263
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.210855 0.789131 CS pos: 16-17. Pr: 0.7105

TMHMM  Annotations      help

There is no transmembrane helices in PITG_19729-t26_1-p1.