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CAZyme Information: PITG_19623-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora infestans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans | |||||||||||
| CAZyme ID | PITG_19623-t26_1-p1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | polygalacturonase, putative | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 63 | 366 | 6.3e-60 | 0.9261538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 9.16e-70 | 65 | 362 | 1 | 304 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 5.99e-24 | 64 | 347 | 94 | 391 | polygalacturonase ADPG |
| 215426 | PLN02793 | 1.13e-22 | 64 | 335 | 79 | 360 | Probable polygalacturonase |
| 215540 | PLN03010 | 1.42e-21 | 117 | 362 | 141 | 375 | polygalacturonase |
| 227721 | Pgu1 | 2.03e-21 | 116 | 372 | 200 | 458 | Polygalacturonase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.13e-234 | 1 | 378 | 1 | 395 | |
| 5.01e-209 | 1 | 378 | 1 | 361 | |
| 1.84e-204 | 1 | 378 | 1 | 380 | |
| 2.13e-199 | 1 | 378 | 1 | 402 | |
| 2.68e-198 | 1 | 378 | 1 | 414 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.38e-67 | 38 | 368 | 2 | 333 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.38e-67 | 38 | 368 | 2 | 333 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.49e-67 | 50 | 368 | 3 | 325 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.24e-58 | 63 | 362 | 20 | 322 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 6.32e-58 | 50 | 362 | 3 | 319 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.23e-66 | 45 | 366 | 29 | 354 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
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| 9.23e-66 | 45 | 366 | 29 | 354 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
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| 9.23e-66 | 45 | 366 | 29 | 354 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
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| 2.87e-64 | 63 | 376 | 62 | 378 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
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| 2.04e-63 | 49 | 368 | 29 | 353 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000243 | 0.999746 | CS pos: 20-21. Pr: 0.9850 |