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CAZyme Information: PITG_19619-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora infestans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans | |||||||||||
| CAZyme ID | PITG_19619-t26_1-p1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | polygalacturonase, putative | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 88 | 218 | 2e-36 | 0.37846153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.84e-41 | 49 | 293 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 2.88e-14 | 87 | 292 | 204 | 432 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 2.71e-11 | 88 | 221 | 119 | 248 | Probable polygalacturonase At3g15720 |
| 215540 | PLN03010 | 4.01e-11 | 88 | 222 | 145 | 270 | polygalacturonase |
| 215426 | PLN02793 | 2.39e-10 | 88 | 256 | 149 | 320 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 8.07e-144 | 1 | 293 | 1 | 362 | |
| 3.68e-135 | 1 | 293 | 1 | 362 | |
| 1.41e-122 | 1 | 293 | 1 | 361 | |
| 1.41e-122 | 1 | 293 | 1 | 361 | |
| 1.15e-121 | 1 | 293 | 1 | 361 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.31e-31 | 48 | 293 | 21 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 2.04e-29 | 29 | 293 | 6 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.04e-29 | 29 | 293 | 6 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.45e-28 | 33 | 215 | 2 | 206 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.24e-28 | 32 | 293 | 1 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.75e-34 | 28 | 215 | 27 | 249 | Polygalacturonase OS=Penicillium expansum OX=27334 GN=PEPG1 PE=3 SV=1 |
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| 1.81e-32 | 28 | 293 | 48 | 378 | Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1 |
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| 5.27e-32 | 27 | 293 | 24 | 363 | Probable endopolygalacturonase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaB PE=3 SV=1 |
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| 1.02e-31 | 1 | 293 | 1 | 363 | Probable endopolygalacturonase A OS=Aspergillus parasiticus OX=5067 GN=pgaA PE=2 SV=1 |
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| 1.83e-31 | 28 | 293 | 48 | 378 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000218 | 0.999784 | CS pos: 20-21. Pr: 0.9755 |