You are browsing environment: FUNGIDB
CAZyme Information: PITG_19366-t26_1-p1
You are here: Home > Sequence: PITG_19366-t26_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytophthora infestans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans | |||||||||||
| CAZyme ID | PITG_19366-t26_1-p1 | |||||||||||
| CAZy Family | GT71 | |||||||||||
| CAZyme Description | polysaccharide lyase, putative | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL3 | 32 | 228 | 1.6e-76 | 0.9948453608247423 |
| PL3 | 270 | 455 | 6e-73 | 0.9484536082474226 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397360 | Pectate_lyase | 4.33e-85 | 27 | 232 | 2 | 199 | Pectate lyase. |
| 397360 | Pectate_lyase | 8.60e-82 | 264 | 463 | 2 | 192 | Pectate lyase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.79e-142 | 1 | 289 | 1 | 279 | |
| 3.28e-112 | 21 | 251 | 28 | 256 | |
| 9.18e-104 | 24 | 251 | 31 | 256 | |
| 2.08e-89 | 13 | 252 | 10 | 272 | |
| 2.94e-89 | 17 | 252 | 16 | 272 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.06e-23 | 281 | 408 | 11 | 135 | Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15] |
|
| 1.98e-20 | 63 | 255 | 24 | 225 | Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B90_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi] |
|
| 4.73e-20 | 34 | 172 | 6 | 138 | The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725] |
|
| 4.84e-20 | 34 | 172 | 7 | 139 | The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii],3T9G_B The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii] |
|
| 1.39e-19 | 63 | 255 | 142 | 343 | Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B4N_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_A Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.07e-57 | 14 | 250 | 10 | 237 | Probable pectate lyase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyD PE=3 SV=1 |
|
| 2.07e-57 | 14 | 250 | 10 | 237 | Probable pectate lyase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyD PE=3 SV=1 |
|
| 4.17e-54 | 30 | 250 | 28 | 241 | Probable pectate lyase G OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyG PE=3 SV=1 |
|
| 9.13e-53 | 30 | 250 | 41 | 255 | Pectate lyase H OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyH PE=1 SV=1 |
|
| 1.50e-52 | 30 | 250 | 37 | 249 | Probable pectate lyase E OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyE PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000303 | 0.999709 | CS pos: 22-23. Pr: 0.9366 |