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CAZyme Information: PITG_18907-t26_1-p1

You are here: Home > Sequence: PITG_18907-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_18907-t26_1-p1
CAZy Family GT71
CAZyme Description pectinesterase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
330 DS028203|CGC1 35370.18 4.3451
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 26 310 1e-71 0.9548611111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 1.08e-41 26 316 13 287
putative pectinesterase
395871 Pectinesterase 1.21e-41 26 303 2 276
Pectinesterase.
215173 PLN02304 6.23e-41 28 306 79 355
probable pectinesterase
178113 PLN02497 2.92e-40 26 308 34 309
probable pectinesterase
178372 PLN02773 1.35e-39 21 326 2 297
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.29e-173 12 330 26 348
5.32e-169 12 330 23 344
1.07e-168 12 330 23 344
6.64e-168 12 330 23 347
9.77e-168 12 330 25 348

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.33e-54 18 329 3 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
3.29e-54 18 329 3 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.10e-32 26 303 9 283
Pectin methylesterase from Carrot [Daucus carota]
1.07e-30 36 328 13 307
Chain A, Pectinesterase 1 [Solanum lycopersicum]
2.02e-11 27 249 7 247
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.37e-73 18 329 20 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.91e-70 18 330 20 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
1.95e-65 18 329 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.95e-65 18 329 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
3.88e-65 18 329 28 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000012 0.000026

TMHMM  Annotations      help

There is no transmembrane helices in PITG_18907-t26_1-p1.