logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PITG_18450-t26_1-p1

You are here: Home > Sequence: PITG_18450-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_18450-t26_1-p1
CAZy Family GT71
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
203 22517.25 5.2279
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_18450-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 21 186 1.5e-47 0.6938775510204082

CDD Domains      help

PITG_18450-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.16e-153 1 203 1 203
4.27e-125 1 200 1 203
2.64e-119 1 200 1 203
6.31e-99 1 200 1 201
3.64e-98 1 200 1 201

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.96e-23 71 183 51 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_18450-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000251 0.999730 CS pos: 27-28. Pr: 0.9551

TMHMM  Annotations      help

There is no transmembrane helices in PITG_18450-t26_1-p1.