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CAZyme Information: PITG_18230-t26_1-p1

You are here: Home > Sequence: PITG_18230-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_18230-t26_1-p1
CAZy Family GT60
CAZyme Description glycoside hydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
409 DS028183|CGC1 46520.07 5.5189
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 118 406 2.7e-83 0.6410256410256411

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 7.56e-166 7 407 5 453
Glycosyl hydrolase family 1.
274539 BGL 4.63e-156 8 398 1 426
beta-galactosidase.
225343 BglB 1.68e-129 5 406 2 454
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 7.30e-94 7 398 28 476
beta-glucosidase
215455 PLN02849 6.13e-85 7 405 30 483
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.26e-266 1 408 1 474
2.50e-148 6 405 3 456
4.54e-148 6 405 3 456
5.19e-148 7 405 4 456
6.22e-148 7 406 4 457

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.10e-124 2 402 26 480
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
3.61e-122 2 406 6 449
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
5.47e-118 6 406 12 464
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
1.83e-102 7 404 20 481
Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGL_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_A Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],2RGM_B Rice BGlu1 beta-glucosidase, a plant exoglucanase/beta-glucosidase [Oryza sativa Japonica Group],7BZM_A Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group],7BZM_B Crystal structure of rice Os3BGlu7 with glucoimidazole [Oryza sativa Japonica Group]
2.35e-102 8 395 4 452
Crystal structure of the double mutant L167W / P172L of the beta-glucosidase from Trichoderma harzianum [Trichoderma harzianum],6EFU_B Crystal structure of the double mutant L167W / P172L of the beta-glucosidase from Trichoderma harzianum [Trichoderma harzianum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.49e-105 7 405 15 474
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1
4.25e-102 7 405 35 499
Beta-glucosidase 43 OS=Arabidopsis thaliana OX=3702 GN=BGLU43 PE=2 SV=2
4.63e-102 7 404 43 504
Beta-glucosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU7 PE=1 SV=1
1.12e-100 1 407 1 448
Beta-glucosidase A OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglA PE=1 SV=1
1.30e-100 7 405 44 510
Beta-glucosidase 44 OS=Arabidopsis thaliana OX=3702 GN=BGLU44 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000049 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PITG_18230-t26_1-p1.