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CAZyme Information: PITG_18209-t26_1-p1

You are here: Home > Sequence: PITG_18209-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_18209-t26_1-p1
CAZy Family GT60
CAZyme Description glycoside hydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
459 52342.46 5.0660
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 6 456 8.8e-158 0.9883449883449883

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 0.0 7 457 5 453
Glycosyl hydrolase family 1.
274539 BGL 2.03e-177 8 448 1 426
beta-galactosidase.
225343 BglB 1.96e-156 5 456 2 454
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 5.98e-120 7 448 28 476
beta-glucosidase
215455 PLN02849 6.01e-106 7 455 30 483
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 458 1 474
1.26e-186 7 455 4 456
2.20e-186 6 455 3 456
1.14e-185 6 455 3 456
1.99e-185 6 455 3 456

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.84e-149 2 452 26 480
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
5.45e-148 2 456 6 449
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
6.07e-144 6 456 12 464
Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_B Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8],4GXP_C Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA [Thermotoga maritima MSB8]
6.86e-132 6 445 8 452
Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E3Z_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium],2E40_A Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E40_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium]
2.97e-130 1 451 2 474
Trichoderma harzianum GH1 beta-glucosidase ThBgl2 [Trichoderma harzianum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.14e-134 7 455 15 474
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1
1.47e-132 6 444 10 463
Beta-glucosidase 1B OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1B PE=1 SV=1
3.20e-131 6 445 5 449
Beta-glucosidase 1A OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1A PE=1 SV=1
1.12e-128 7 454 43 504
Beta-glucosidase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU7 PE=1 SV=1
2.31e-127 7 448 21 475
Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000051 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PITG_18209-t26_1-p1.