CAZyme Information: PITG_17546-t26_1-p1

Basic Information

• Species: Phytophthora infestans
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
• CAZyme ID: PITG_17546-t26_1-p1
• CAZy Family: GT48
• CAZyme Description: glycoside hydrolase, putative

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
683	DS028177|CGC1	75363.35	4.7861

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PinfestansT30-4	19344	403677	1547	17797

• Gene Location: location=DS028177:52551-54722(-)

Full Sequence      

MNGTTRTLNETAVRLFAKQHVGSYLNTYWDGPVNGSYGYNASEFRSLIQRIQTISMEENG
GHPIIYGIDSVHGANYVDGPVLMPQQINSGASFNPDLVYEVARITARDTEAAGISWVFGP
ILDISQNTLWSRTYETFGEDPYLVSVMGAALVRGLQSYNQTAACIKHFVGYSKTPTGHDR
DNVNMPDFDLLNYFLPPFKAAFEAGALTTMENYISLNGDPVVASSRILNDLLRSDLGFNG
VLLSDWNEIYNLHDFHRVSATREEAVGTSLKQTSIDMSMVATDTDFIKYGLNMLKENPDQ
ETRLRESAKRIIKLKLQLGLYDNPVPGKEYVSMVANEKDKETALEMARESIVLLKNEDDV
LPLPKNASVFLTGHSADNVGLQCGGWTFIWQGYSGNDMFNNGITVRKGLENLVGNDSFTY
FNGLQVNGSISNADLAKAVELASQHEYTVAVIGEPNYTEKAGDIFDPTLPEGQQKYIEAL
AATGTKVVVVLFEGRPRLLGSIPDNAAAIIDGMLPCELGGQAMAEILYGDVNPSGKLPIT
YPKDPANTAIPYNHRVTTRCMWDNCWMQWHFGAGLSYTKFNYSSVTLDKTTTVMLFLIQP
FRKISVPEMKMLKKFKKIELQAGESMDIGTGLKRIVEDSKYVVAVKPDTWCDVYADNITN
PLCAEFTIDTSSGAGTVSVGVQL

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	58	279	2e-62	0.9722222222222222

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	6.92e-100	63	625	105	718	beta-glucosidase BglX.
224389	BglX	1.02e-72	44	387	40	372	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747	Glyco_hydro_3	2.44e-53	9	314	20	316	Glycosyl hydrolase family 3 N terminal domain.
178629	PLN03080	3.57e-51	73	583	100	639	Probable beta-xylosidase; Provisional
396478	Glyco_hydro_3_C	2.44e-49	351	577	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	0.0	1	682	55	776
UIZ29613.1|GH3	0.0	1	671	99	822
UIZ29432.1|GH3	3.34e-316	8	671	61	766
CCA27737.1|GH3	1.50e-260	8	668	99	808
UIZ27116.1|GH3	1.00e-257	6	668	14	724

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	2.05e-109	15	656	62	749	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
5M6G_A	2.09e-79	61	541	121	587	Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea [Saccharopolyspora erythraea D]
6R5I_A	1.26e-73	63	628	73	689	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	6.47e-73	63	628	73	689	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	6.58e-73	63	628	74	690	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q23892|GLUA_DICDI	1.64e-124	5	628	109	782	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|A7LXU3|BGH3B_BACO1	1.47e-108	15	656	84	771	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|Q56078|BGLX_SALTY	1.24e-80	63	624	105	717	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|P33363|BGLX_ECOLI	1.73e-79	63	628	105	721	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	1.07e-75	47	652	50	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000030	0.000021

TMHMM  Annotations     

There is no transmembrane helices in PITG_17546-t26_1-p1.