CAZyme Information: PITG_16558-t26_1-p1

Basic Information

• Species: Phytophthora infestans
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
• CAZyme ID: PITG_16558-t26_1-p1
• CAZy Family: GT20
• CAZyme Description: glycoside hydrolase, putative

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
732		80922.08	4.5208

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PinfestansT30-4	19344	403677	1547	17797

• Gene Location: location=DS028161:1151942-1154357(-)

Full Sequence      

MTQIYINQLLTEDNKVDDDKVRAYTKMRVGSYLTSPFNNGPVNGTYMWTADEWRVDSVHG
AIFVKDAVLFGQQINGGASFNPDLVYEQGRITGRDTEASGVPWVFGPILGISRNPLWART
FETFSEDPHINSVMGDAIIRGLQSNNHTAACMKHWIVYPKTPSGHDKDAVTVSDYDMMNY
FFPPFKAAVDAGVISAMENYISINGVPTVSNTKLMNALLRDDLGFDGMMLTDFHRTARNE
TEATRISLTRASVDMSMVAQDTSFYNGTKALLEQSPQFRERLKESARRVVKMKLQLGLYE
TPVRGEENLALIGNDDDISAALELARESIVLLQNNDSTLPLKEDASVFLTGFIADNIGRM
CGGWTIAWQGYSDQDHLLTKGITVKSAMETLVGNDSFGFFNGLHPNGSYTEADLATAKEL
ASNAEYTIAVIGKDTYAEKPGDIDDLALPAGQIEYVKELASTGTKVILVLFEGRPRLLGD
LPETVHAVVNGLLACELVGQAMAEIIYGKVNPSGRMPITYPKDQANIQMTYNHPVTSMCQ
TQESDGAYYCENQWDFGTGLSYTEFTYSEVRLSRNVVTSLAEDVVVSVDVTNAGSEAGKE
TVMLFLIQPYNSLNVPEMKQLKKFSKISLEPGQTQNVNFTLTSDDWSVYYPQVGHGIKKV
AEDCEYVVAIKPETDCDVYNETAVANPLCATFSLNTGEYSFGTFEEPCKTISSSSALYEF
RPSEFRRINSSK

Enzyme Prediction     

EC	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	53	258	3.1e-53	0.9398148148148148

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	6.70e-102	78	670	128	750	beta-glucosidase BglX.
224389	BglX	1.54e-60	77	387	90	394	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	1.30e-49	52	641	85	742	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	1.95e-39	53	289	70	313	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	2.42e-34	329	562	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ29009.1|GH3	2.42e-276	1	695	46	763
UIZ27116.1|GH3	1.12e-264	1	694	1	724
UIZ29613.1|GH3	2.71e-244	1	695	90	820
UIZ29432.1|GH3	3.84e-243	1	695	45	764
CCA27737.1|GH3	8.28e-237	1	695	84	809

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JP0_A	3.30e-112	53	645	106	718	Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus],5JP0_B Bacteroides ovatus Xyloglucan PUL GH3B with bound glucose [Bacteroides ovatus]
6R5I_A	1.42e-79	69	670	87	718	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	7.33e-79	69	670	87	718	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A	7.48e-79	69	670	88	719	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	1.35e-78	69	670	119	750	Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A7LXU3|BGH3B_BACO1	2.38e-111	53	645	128	740	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
sp|Q23892|GLUA_DICDI	3.88e-104	1	670	96	811	Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
sp|Q56078|BGLX_SALTY	1.73e-74	56	641	111	725	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|P33363|BGLX_ECOLI	6.33e-74	62	641	106	725	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|T2KMH0|PLH24_FORAG	2.74e-71	13	677	30	713	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000020	0.000009

TMHMM  Annotations     

There is no transmembrane helices in PITG_16558-t26_1-p1.