logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PITG_16507-t26_1-p1

You are here: Home > Sequence: PITG_16507-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_16507-t26_1-p1
CAZy Family GT2
CAZyme Description glycoside hydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
537 58228.80 4.9696
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_16507-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 61 228 1.6e-20 0.7731481481481481

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 3.28e-83 3 536 21 596
Probable beta-xylosidase; Provisional
185053 PRK15098 9.17e-66 89 532 118 602
beta-glucosidase BglX.
396478 Glyco_hydro_3_C 2.13e-47 336 524 1 187
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.65e-179 23 537 35 596
4.55e-167 109 532 1 475
3.32e-86 14 537 26 586
9.06e-81 17 523 5 547
2.60e-80 14 537 25 585

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.50e-70 25 537 16 562
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
1.29e-69 25 537 16 562
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
1.07e-50 14 522 32 570
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
2.32e-50 25 522 43 571
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
2.34e-50 25 522 43 571
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.48e-80 14 523 32 575
Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=bxlB PE=3 SV=1
2.62e-76 22 523 42 577
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
2.80e-75 14 523 32 575
Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=bxlB PE=3 SV=2
1.14e-74 14 537 30 585
Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=bxlB PE=3 SV=1
2.03e-74 14 523 32 575
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bxlB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000065 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PITG_16507-t26_1-p1.