logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PITG_15576-t26_1-p1

You are here: Home > Sequence: PITG_15576-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_15576-t26_1-p1
CAZy Family GT1
CAZyme Description glycoside hydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
261 28777.31 4.9079
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_15576-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 29 180 3.1e-22 0.42441860465116277

CDD Domains      help

PITG_15576-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.37e-20 25 244 363 577
1.01e-18 18 241 364 576
3.50e-15 41 231 383 567
1.59e-14 41 248 390 592
3.78e-14 43 241 399 590

PDB Hits      help

PITG_15576-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PITG_15576-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000052 0.000005

TMHMM  Annotations      help

There is no transmembrane helices in PITG_15576-t26_1-p1.