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CAZyme Information: PITG_15377-t26_1-p1

You are here: Home > Sequence: PITG_15377-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_15377-t26_1-p1
CAZy Family GT1
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 DS028154|CGC1 55984.35 6.5890
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_15377-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 66 377 8.7e-55 0.990909090909091

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 5.20e-38 66 377 2 349
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.98e-194 4 491 2 511
1.50e-166 1 497 7 496
2.06e-155 1 502 4 489
1.16e-147 26 411 10 397
5.05e-41 73 395 67 385

PDB Hits      help

PITG_15377-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.72e-13 132 312 64 251
[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000462 0.999487 CS pos: 20-21. Pr: 0.9693

TMHMM  Annotations      download full data without filtering help

Start End
462 479