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CAZyme Information: PITG_12339-t26_1-p1
Basic Information
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| Species |
Phytophthora infestans
|
| Lineage |
Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
|
| CAZyme ID |
PITG_12339-t26_1-p1
|
| CAZy Family |
GH5 |
| CAZyme Description |
conserved hypothetical protein
|
| CAZyme Property |
| Protein Length |
CGC |
Molecular Weight |
Isoelectric Point |
| 482 |
|
52150.32 |
4.3559 |
|
| Genome Property |
| Genome Version/Assembly ID |
Genes |
Strain NCBI Taxon ID |
Non Protein Coding Genes |
Protein Coding Genes |
| FungiDB-61_PinfestansT30-4 |
19344 |
403677 |
1547 |
17797
|
|
| Gene Location |
| Family |
Start |
End |
Evalue |
family coverage |
| GH30 |
37 |
473 |
5.8e-122 |
0.9846491228070176 |
| Cdd ID |
Domain |
E-Value |
qStart |
qEnd |
sStart |
sEnd |
Domain Description |
| 405300
|
Glyco_hydr_30_2 |
3.81e-12 |
35 |
222 |
8 |
195 |
O-Glycosyl hydrolase family 30. |
| 227807
|
XynC |
3.66e-09 |
83 |
473 |
77 |
426 |
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]. |
| Hit ID |
E-Value |
Query Start |
Query End |
Hit Start |
Hit End |
| 3.35e-216 |
3 |
476 |
4 |
497 |
| 1.96e-150 |
26 |
479 |
32 |
498 |
| 8.54e-147 |
26 |
479 |
33 |
499 |
| 1.38e-145 |
26 |
479 |
33 |
499 |
| 1.38e-145 |
26 |
479 |
33 |
499 |
PITG_12339-t26_1-p1 has no PDB hit.
| Hit ID |
E-Value |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6.08e-117 |
21 |
480 |
7 |
478 |
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1 |
| 3.42e-16 |
5 |
350 |
6 |
445 |
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1 |
This protein is predicted as SP
| Other |
SP_Sec_SPI |
CS Position |
| 0.007148 |
0.992827 |
CS pos: 25-26. Pr: 0.7947 |
There is no transmembrane helices in PITG_12339-t26_1-p1.
