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CAZyme Information: PITG_11946-t26_1-p1

You are here: Home > Sequence: PITG_11946-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_11946-t26_1-p1
CAZy Family GH5
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
218 DS028138|CGC4 24467.55 7.0815
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_11946-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 198 3e-57 0.6653061224489796

CDD Domains      help

PITG_11946-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.23e-166 1 218 1 218
1.10e-123 1 197 1 197
1.10e-123 1 197 1 197
1.57e-123 1 197 1 197
4.48e-123 1 197 1 197

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.12e-10 25 197 1 164
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_11946-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.220822 0.779138 CS pos: 24-25. Pr: 0.7148

TMHMM  Annotations      download full data without filtering help

Start End
7 29