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CAZyme Information: PITG_11944-t26_1-p1

You are here: Home > Sequence: PITG_11944-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_11944-t26_1-p1
CAZy Family GH5
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
302 DS028138|CGC2 32026.36 4.3640
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_11944-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 271 2e-67 0.9755102040816327

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225762 PhnD 0.001 25 97 60 153
ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-187 1 302 1 302
9.09e-150 4 301 4 300
3.69e-149 4 301 4 300
3.69e-149 4 301 4 300
1.83e-137 5 301 2 300

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.66e-18 23 197 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_11944-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000452 0.999520 CS pos: 22-23. Pr: 0.9188

TMHMM  Annotations      help

There is no transmembrane helices in PITG_11944-t26_1-p1.