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CAZyme Information: PITG_11943-t26_1-p1

You are here: Home > Sequence: PITG_11943-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_11943-t26_1-p1
CAZy Family GH5
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
172 DS028138|CGC1 18784.72 3.9951
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_11943-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 3 172 1.9e-52 0.6408163265306123

CDD Domains      help

PITG_11943-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.31e-133 1 172 1 172
2.84e-127 1 172 17 188
2.84e-127 1 172 17 188
2.84e-127 1 172 17 188
4.54e-116 1 172 1 172

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.15e-08 67 166 43 152
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_11943-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000043 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in PITG_11943-t26_1-p1.