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CAZyme Information: PITG_11940-t26_1-p1

You are here: Home > Sequence: PITG_11940-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_11940-t26_1-p1
CAZy Family GH5
CAZyme Description chitin-binding protein, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
271 DS028138|CGC2 28492.67 6.4734
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_11940-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 71 188 1.6e-21 0.7005988023952096

CDD Domains      help

PITG_11940-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.88e-17 79 206 73 200
5.54e-16 10 199 4 192
5.54e-16 10 199 4 192
5.54e-16 10 199 4 192
1.04e-15 79 199 73 192

PDB Hits      help

PITG_11940-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

PITG_11940-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.311758 0.688218 CS pos: 22-23. Pr: 0.6304

TMHMM  Annotations      help

There is no transmembrane helices in PITG_11940-t26_1-p1.