logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PITG_10499-t26_1-p1

You are here: Home > Sequence: PITG_10499-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_10499-t26_1-p1
CAZy Family GH30
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
323 35714.67 8.6937
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_10499-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 3 176 1.9e-43 0.689795918367347

CDD Domains      help

PITG_10499-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-117 3 169 33 199
1.15e-117 3 169 33 199
1.15e-117 3 169 33 199
1.21e-76 3 163 30 186
1.95e-75 3 163 30 186

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.34e-24 1 163 4 171
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_10499-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000043 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PITG_10499-t26_1-p1.