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CAZyme Information: PITG_08944-t26_1-p1

You are here: Home > Sequence: PITG_08944-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_08944-t26_1-p1
CAZy Family GH28
CAZyme Description endoglucanase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
240 26493.04 8.3677
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.151:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 91 239 1.5e-38 0.9871794871794872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 2.74e-41 33 240 1 207
Glycosyl hydrolase family 12.
235746 PRK06215 1.33e-10 33 182 50 180
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-172 1 240 1 240
1.15e-172 1 240 1 240
1.15e-172 1 240 1 240
1.15e-172 1 240 1 240
1.15e-172 1 240 1 240

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.00e-62 22 239 26 242
Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus],4NPR_B Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus [Aspergillus niveus]
1.49e-61 20 239 4 221
Crystal structure of xeg-edgp [Aspergillus aculeatus],3VLB_D Crystal structure of xeg-edgp [Aspergillus aculeatus]
1.05e-60 23 239 14 228
Crystal structure of XEG [Aspergillus aculeatus],3VL9_A Crystal structure of xeg-xyloglucan [Aspergillus aculeatus],3VL9_B Crystal structure of xeg-xyloglucan [Aspergillus aculeatus]
1.26e-46 11 240 6 235
CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550],5M2D_B CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550]
7.16e-45 33 239 13 218
Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 [Aspergillus aculeatus],5GM3_B Crystal structure of FI-CMCase from Aspergillus aculeatus F-50 [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.00e-72 11 240 9 238
Inactive glycoside hydrolase XLP1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XLP1 PE=1 SV=1
2.95e-72 1 240 1 239
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xgeA PE=1 SV=1
2.92e-70 1 240 1 241
Xyloglucan-specific endo-beta-1,4-glucanase 1 OS=Phytophthora parasitica (strain INRA-310) OX=761204 GN=XEG1 PE=1 SV=1
3.34e-69 12 240 14 241
Xyloglucan-specific endo-beta-1,4-glucanase 1 OS=Phytophthora sojae (strain P6497) OX=1094619 GN=XEG1 PE=1 SV=1
2.02e-65 3 239 4 240
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger OX=5061 GN=xgeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000221 0.999767 CS pos: 20-21. Pr: 0.9781

TMHMM  Annotations      help

There is no transmembrane helices in PITG_08944-t26_1-p1.