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CAZyme Information: PITG_08910-t26_1-p1

You are here: Home > Sequence: PITG_08910-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_08910-t26_1-p1
CAZy Family GH28
CAZyme Description pectinesterase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
234 25830.48 4.4008
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 45 210 3.8e-55 0.5833333333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178113 PLN02497 2.87e-43 33 211 126 308
probable pectinesterase
215357 PLN02665 5.44e-39 50 210 178 341
pectinesterase family protein
395871 Pectinesterase 4.68e-38 51 207 107 276
Pectinesterase.
178372 PLN02773 6.54e-37 50 209 121 282
pectinesterase
178051 PLN02432 1.48e-36 37 223 100 285
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.97e-122 1 234 90 347
1.24e-121 1 234 93 348
2.50e-121 1 234 92 348
4.05e-117 1 234 90 344
1.16e-116 1 234 90 344

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.98e-43 1 233 59 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.98e-43 1 233 59 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
4.34e-27 46 207 109 283
Pectin methylesterase from Carrot [Daucus carota]
5.86e-27 66 207 125 279
Chain A, Pectinesterase 1 [Solanum lycopersicum]
2.23e-07 48 201 127 315
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.01e-56 3 234 81 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
5.30e-54 3 233 81 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
2.17e-51 1 233 84 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
1.21e-50 1 233 84 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.21e-50 1 233 84 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000046 0.000005

TMHMM  Annotations      help

There is no transmembrane helices in PITG_08910-t26_1-p1.