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CAZyme Information: PITG_08895-t26_1-p1

You are here: Home > Sequence: PITG_08895-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_08895-t26_1-p1
CAZy Family GH28
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
196 DS028133|CGC2 21611.29 7.1962
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_08895-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 180 1.2e-53 0.6612244897959184

CDD Domains      help

PITG_08895-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.56e-148 1 196 1 196
8.39e-123 1 195 1 187
8.39e-123 1 195 1 187
2.40e-122 1 195 1 187
4.44e-122 1 195 19 205

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.62e-16 23 193 1 168
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_08895-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000259 0.999718 CS pos: 22-23. Pr: 0.9712

TMHMM  Annotations      help

There is no transmembrane helices in PITG_08895-t26_1-p1.