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CAZyme Information: PITG_08027-t26_1-p1

You are here: Home > Sequence: PITG_08027-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_08027-t26_1-p1
CAZy Family GH16
CAZyme Description beta-D-xylosidase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
709 DS028129|CGC5 77533.19 6.6044
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 31 279 9.8e-69 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 0.0 5 687 50 778
Probable beta-xylosidase; Provisional
185053 PRK15098 7.14e-96 65 677 118 750
beta-glucosidase BglX.
224389 BglX 2.81e-63 64 378 80 363
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
396478 Glyco_hydro_3_C 1.39e-62 349 582 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
395747 Glyco_hydro_3 8.39e-39 61 312 82 314
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.80e-199 14 687 62 766
2.40e-197 4 687 57 769
3.40e-197 7 687 60 775
3.50e-197 12 691 54 767
1.59e-196 7 686 53 773

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.91e-159 15 688 33 731
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5.91e-159 15 688 33 731
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
4.11e-142 7 679 52 743
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
4.23e-142 7 679 52 743
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
7.79e-137 7 696 52 757
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.22e-191 7 677 48 756
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
1.60e-190 14 686 71 772
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
1.44e-188 12 687 64 771
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1
7.15e-188 7 664 51 744
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
1.90e-187 14 687 61 759
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000038 0.000006

TMHMM  Annotations      help

There is no transmembrane helices in PITG_08027-t26_1-p1.