CAZyme Information: PITG_06134-t26_1-p1

Basic Information

• Species: Phytophthora infestans
• Lineage: Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
• CAZyme ID: PITG_06134-t26_1-p1
• CAZy Family: GH13
• CAZyme Description: conserved hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
499		53959.40	4.4567

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PinfestansT30-4	19344	403677	1547	17797

• Gene Location: location=DS028126:3798205-3799704(-)

Full Sequence      

MLTIRSLAASALACAFLSANPSLVAADYTVKADAASTVQGTWDGWGTSLCWWANVFGDRA
DIADALFTLNETVAVDGAGDIPGLGFNIARYNIGGSSSNVVDDSGTEVAMKTSENMPAFK
FMESFWLDWMSKDAASTSWNWKADVKQRAMLTLANQRGANQLEAFSNSPPWWMTNNRATA
GGADGKKDNLQEWNHDEFVLYLATVVSKAKSDWGIKFTFVEPFNEPSETWWEFPGKQEGC
HFSVDTQQTILPLLRKQLDALELQDVAIATSDENSATEALHTLDTMSGNADVMGSFEKVN
THGYQGLEAYRGPDRGGLRDLTNKLMKSLWDSEYGEKDATGLTMAESIGLDINEMGVSGF
VYWQALDSGGWGLIQSNPGDKWIGTPNPKYYVMAQYSRHVRPGMQILASDDAKTVLGYDS
AKKLLVVVTVNMGDAQTVTFDLASFAAVAGPINAWTTETSGKGALHKASTVKATGKSFSA
AFPAGSVMTFEIEGVTLAA

Enzyme Prediction     

EC	3.2.1.164:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	37	490	3.3e-134	0.9846491228070176

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
405300	Glyco_hydr_30_2	3.91e-17	35	239	8	195	O-Glycosyl hydrolase family 30.
227807	XynC	7.47e-09	134	490	88	426	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UIZ26121.1|GH30_5	1.48e-226	3	493	4	497
ATB44315.1|GH30_5	5.76e-162	26	496	32	498
QRN98147.1|GH30_5	3.59e-158	26	496	33	499
ADO68177.1|GH30_5	8.25e-157	26	496	33	499
EAU67098.1|GH30_5	8.25e-157	26	496	33	499

PDB Hits     

PITG_06134-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q76FP5|6GAL_HYPRU	1.58e-127	21	497	7	478	Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
sp|A0A401ETL2|EXGAL_BIFL2	1.19e-15	5	367	6	445	Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.006703	0.993275	CS pos: 26-27. Pr: 0.4662

TMHMM  Annotations     

There is no transmembrane helices in PITG_06134-t26_1-p1.