logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: PITG_04948-t26_1-p1

You are here: Home > Sequence: PITG_04948-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_04948-t26_1-p1
CAZy Family GH105
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
232 DS028123|CGC4 25165.06 5.6565
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 218 3.4e-64 0.8

CDD Domains      help

PITG_04948-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.72e-167 1 232 1 232
9.46e-151 1 213 1 213
3.85e-150 1 213 1 213
5.47e-150 1 213 1 213
1.57e-149 1 212 1 212

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.26e-98 24 196 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

PITG_04948-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000394 0.999559 CS pos: 23-24. Pr: 0.9727

TMHMM  Annotations      help

There is no transmembrane helices in PITG_04948-t26_1-p1.