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CAZyme Information: PITG_04141-t26_1-p1

You are here: Home > Sequence: PITG_04141-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_04141-t26_1-p1
CAZy Family GH1
CAZyme Description glycoside hydrolase, putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
299 33108.25 6.8301
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_04141-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 26 284 2.1e-18 0.9871382636655949

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 1.95e-21 1 277 5 304
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033 Glyco_hydro_17 2.02e-05 192 284 212 307
Glycosyl hydrolases family 17.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.92e-149 7 285 10 288
2.10e-94 19 281 567 829
5.62e-74 10 288 13 291
5.64e-52 10 196 13 200
1.54e-40 14 286 10 283

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.94e-11 35 284 50 292
Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.32e-12 109 221 120 248
Probable glucan endo-1,3-beta-glucosidase eglC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=eglC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000348 0.999637 CS pos: 20-21. Pr: 0.7191

TMHMM  Annotations      help

There is no transmembrane helices in PITG_04141-t26_1-p1.