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CAZyme Information: PITG_03979-t26_1-p1

You are here: Home > Sequence: PITG_03979-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_03979-t26_1-p1
CAZy Family CE8|CE8
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
383 42087.69 7.7789
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_03979-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 95 336 5.9e-18 0.8938906752411575

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 1.52e-23 56 333 45 305
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
226973 COG4625 0.004 102 294 117 313
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.15e-144 121 380 16 279
3.46e-110 58 343 94 381
5.05e-100 53 343 299 591
1.70e-94 53 332 20 304
1.31e-91 56 304 309 559

PDB Hits      help

PITG_03979-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.16e-09 84 336 44 296
Glucan 1,3-beta-glucosidase ARB_02797 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02797 PE=1 SV=1
5.73e-07 58 295 304 536
Probable beta-glucosidase btgE OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=btgE PE=3 SV=1
1.78e-06 58 332 310 565
Probable beta-glucosidase btgE OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=btgE PE=3 SV=2
1.78e-06 58 332 310 565
Probable beta-glucosidase btgE OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=btgE PE=3 SV=2
3.22e-06 58 327 348 596
Probable beta-glucosidase btgE OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=btgE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000216 0.999759 CS pos: 25-26. Pr: 0.9754

TMHMM  Annotations      help

There is no transmembrane helices in PITG_03979-t26_1-p1.