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CAZyme Information: PITG_03649-t26_1-p1

You are here: Home > Sequence: PITG_03649-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytophthora infestans
Lineage Oomycota; NA; ; Peronosporaceae; Phytophthora; Phytophthora infestans
CAZyme ID PITG_03649-t26_1-p1
CAZy Family CE8
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
570 67264.14 6.4155
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PinfestansT30-4 19344 403677 1547 17797
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in PITG_03649-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT90 254 550 1e-17 0.804

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214773 CAP10 7.06e-12 252 549 2 211
Putative lipopolysaccharide-modifying enzyme.
310354 Glyco_transf_90 1.53e-05 389 548 154 280
Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 549 1 564
4.65e-138 2 549 4 520
6.59e-94 33 549 24 467
1.52e-52 124 549 92 459
1.52e-52 124 549 92 459

PDB Hits      help

PITG_03649-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.98e-52 101 549 62 483
Uncharacterized protein 179R OS=Invertebrate iridescent virus 6 OX=176652 GN=IIV6-179R PE=4 SV=1
3.66e-45 36 549 7 451
Uncharacterized protein 035R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-035R PE=4 SV=1
3.41e-27 131 549 38 404
Uncharacterized protein 027R OS=Frog virus 3 (isolate Goorha) OX=654924 GN=FV3-027R PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000061 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in PITG_03649-t26_1-p1.